EnhancerDB
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  3. rs566340085[chr2:26221024]
Enhancers that have rs566340085[chr2:26221024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566340085[chr2:26221024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26220525 26221044 EP300 UCSC Txn Factor no Conserved 108431401
chr2 26220568 26221024 JUND UCSC Txn Factor no Conserved 108431402
chr2 26220662 26221086 CTCF UCSC Txn Factor no Conserved 108431409
chr2 26221004 26221025 IRF1 JASPAR yes 72514188
chr2 26221006 26221027 IRF1 JASPAR yes 72514192
chr2 26221010 26221031 IRF1 JASPAR yes 72514193
chr2 26221010 26221031 ZNF263 JASPAR yes 72514194
chr2 26221011 26221032 ZNF263 JASPAR yes 72514195
chr2 26221014 26221035 IRF1 JASPAR yes 72514196
chr2 26221014 26221035 ZNF263 JASPAR yes 72514197
chr2 26221018 26221039 IRF1 JASPAR yes 72514198
chr2 26221018 26221039 ZNF263 JASPAR yes 72514199
chr2 26221022 26221043 IRF1 JASPAR yes 72514200
chr2 26221022 26221043 ZNF263 JASPAR yes 72514201
chr2 26221024 26221045 IRF1 JASPAR yes 72514202
Genes associated with rs566340085[chr2:26221024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More