EnhancerDB
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  3. rs566380873[chr6:35561490]
Enhancers that have rs566380873[chr6:35561490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566380873[chr6:35561490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35561472 35561492 TP63 JASPAR yes 101293108
chr6 35561473 35561491 TP73 JASPAR yes 101293109
chr6 35561477 35561498 REST JASPAR yes 101293110
chr6 35561478 35561497 REST JASPAR yes 101293111
chr6 35561483 35561493 SP1 JASPAR yes 101293112
chr6 35561486 35561491 SP1 TRANSFAC yes 101293113
Genes associated with rs566380873[chr6:35561490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More