EnhancerDB
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  3. rs566385626[chr19:2567155]
Enhancers that have rs566385626[chr19:2567155]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs566385626[chr19:2567155]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2567136 2567157 IRF1 JASPAR yes 112076044
chr19 2567137 2567157 RREB1 JASPAR yes 112076046
chr19 2567137 2567158 IRF1 JASPAR yes 112076047
chr19 2567140 2567155 FOXP1 JASPAR yes 112076048
chr19 2567141 2567156 STAT2 JASPAR yes 112076049
chr19 2567142 2567157 FOXP1 JASPAR yes 112076050
chr19 2567145 2567156 FOXP2 JASPAR yes 112076051
chr19 2567149 2567155 HiNF-A TRANSFAC yes 112076052
chr19 2567153 2567167 ONECUT2 JASPAR yes 112076053
chr19 2567153 2567167 ONECUT3 JASPAR yes 112076054
chr19 2567155 2567164 SRY JASPAR yes 112076055
Genes associated with rs566385626[chr19:2567155], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More