EnhancerDB
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  3. rs566398964[chr12:49626612]
Enhancers that have rs566398964[chr12:49626612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49623729 49631475 enh2326
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs566398964[chr12:49626612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49624905 49626990 ZNF274 GTRD no Blood (GM12878) 21544504
chr12 49624905 49626990 ZNF274 GTRD no Blood (GM12878) 108030029
chr12 49624905 49626990 ZNF274 GTRD no Blood (GM12878) 108030030
chr12 49625219 49626855 ZNF274 GTRD no Blood (GM12878) 21544505
chr12 49625219 49626855 ZNF274 GTRD no Blood (GM12878) 108030031
chr12 49625862 49626959 ZNF274 GTRD no Blood (GM12878) 21544506
chr12 49625862 49626959 ZNF274 GTRD no Blood (GM12878) 108030032
chr12 49625961 49627207 ZNF274 GTRD no Blood (GM12878) 21544507
chr12 49625961 49627207 ZNF274 GTRD no Blood (GM12878) 108030033
chr12 49626566 49627450 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21544508
chr12 49626566 49627450 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030034
chr12 49626603 49628795 POLR2A UCSC Txn Factor no Conserved 108030035
chr12 49626603 49628795 POLR2A UCSC Txn Factor no Conserved 108030036
chr12 49626610 49626616 TCF1 TRANSFAC yes 120766835
chr12 49626610 49627146 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21544509
chr12 49626610 49627146 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030037
chr12 49626612 49626630 E2F3 JASPAR yes 120766836
Genes associated with rs566398964[chr12:49626612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More