EnhancerDB
  1. Home
  2. SNP
  3. rs566428407[chr5:154157680]
Enhancers that have rs566428407[chr5:154157680]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566428407[chr5:154157680]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154157670 154157691 REST JASPAR yes 67057762
chr5 154157671 154157690 REST JASPAR yes 67057763
chr5 154157675 154157685 SP1 JASPAR yes 67057764
Genes associated with rs566428407[chr5:154157680], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More