EnhancerDB
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  3. rs566475149[chr17:78727210]
Enhancers that have rs566475149[chr17:78727210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs566475149[chr17:78727210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 21797104
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307176
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307177
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 21797105
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307178
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307179
chr17 78727205 78727210 SP1 TRANSFAC yes 56275319
Genes associated with rs566475149[chr17:78727210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More