EnhancerDB
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  3. rs566477929[chr12:52592442]
Enhancers that have rs566477929[chr12:52592442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52592399 52592846 vista13461
VISTA
Transcript factors that have rs566477929[chr12:52592442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52592231 52592607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546606
chr12 52592231 52592607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033582
chr12 52592318 52592582 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546607
chr12 52592318 52592582 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033583
chr12 52592425 52592446 ZNF263 JASPAR yes 82406317
chr12 52592425 52592446 ZNF263 JASPAR yes 120926720
chr12 52592427 52592448 ZNF263 JASPAR yes 82406318
chr12 52592427 52592448 ZNF263 JASPAR yes 120926721
chr12 52592430 52592451 ZNF263 JASPAR yes 82406319
chr12 52592430 52592451 ZNF263 JASPAR yes 120926722
chr12 52592433 52592454 ZNF263 JASPAR yes 82406320
chr12 52592433 52592454 ZNF263 JASPAR yes 120926723
chr12 52592436 52592447 FLI1 JASPAR yes 82406321
chr12 52592436 52592447 FLI1 JASPAR yes 120926724
chr12 52592437 52592445 EHF JASPAR yes 82406322
chr12 52592437 52592445 EHF JASPAR yes 120926725
chr12 52592440 52592461 ZNF263 JASPAR yes 82406323
chr12 52592440 52592461 ZNF263 JASPAR yes 120926726
Genes associated with rs566477929[chr12:52592442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More