EnhancerDB
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  3. rs566503034[chr16:85583076]
Enhancers that have rs566503034[chr16:85583076]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566503034[chr16:85583076]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85581547 85584240 TCF7L2 GTRD no Colon (HCT116) 21728643
chr16 85581683 85583875 ZNF274 GTRD no Bone Marrow (K562) 21728646
chr16 85581994 85583977 ZNF274 GTRD no Bone Marrow (K562) 21728648
chr16 85582902 85583952 ZNF143 GTRD no Epithelial (MCF-7) 21728654
chr16 85582917 85583977 ZNF143 GTRD no Epithelial (MCF-7) 21728655
chr16 85582928 85583740 ZNF143 GTRD no Epithelial (MCF-7) 21728656
chr16 85583072 85583082 ID4 JASPAR yes 12075185
chr16 85583072 85583082 TCF4 JASPAR yes 12075186
chr16 85583074 85583079 USF2 TRANSFAC yes 12075187
Genes associated with rs566503034[chr16:85583076], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More