EnhancerDB
  1. Home
  2. SNP
  3. rs566526809[chr1:2175892]
Enhancers that have rs566526809[chr1:2175892]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566526809[chr1:2175892]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2175546 2181036 ZNF274 GTRD no Bone Marrow (K562) 107801815
chr1 2175888 2175898 ID4 JASPAR yes 26226144
chr1 2175888 2175898 TCF3 JASPAR yes 26226145
chr1 2175888 2175898 TCF4 JASPAR yes 26226146
chr1 2175889 2175898 SNAI2 JASPAR yes 26226147
chr1 2175890 2175895 USF2 TRANSFAC yes 26226148
Genes associated with rs566526809[chr1:2175892], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More