EnhancerDB
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  3. rs566554356[chr12:64312398]
Enhancers that have rs566554356[chr12:64312398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 64304505 64318541 enh14780
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566554356[chr12:64312398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 64311646 64312640 TCF7L2 UCSC Txn Factor no Conserved 108041467
chr12 64311646 64312640 TCF7L2 UCSC Txn Factor no Conserved 108041468
chr12 64311845 64312441 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552671
chr12 64311845 64312441 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041528
chr12 64311996 64312492 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21552676
chr12 64311996 64312492 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108041536
chr12 64312044 64312640 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552677
chr12 64312044 64312640 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041537
chr12 64312044 64312640 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041538
chr12 64312096 64312406 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041539
chr12 64312391 64312407 ZNF143 JASPAR yes 121378367
Genes associated with rs566554356[chr12:64312398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More