EnhancerDB
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  3. rs566558391[chr19:6063584]
Enhancers that have rs566558391[chr19:6063584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6055365 6071655 enh17885
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr19 6063576 6063994 vista28414
VISTA
Transcript factors that have rs566558391[chr19:6063584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6062199 6064174 POLR2A UCSC Txn Factor no Conserved 108376706
chr19 6062199 6064174 POLR2A UCSC Txn Factor no Conserved 108376707
chr19 6062859 6063912 TCF7L2 GTRD no Colon (HCT116) 108376716
chr19 6063121 6063775 TCF7L2 GTRD no Colon (HCT116) 108376717
chr19 6063270 6064030 TCF7L2 GTRD no Colon (HCT116) 108376718
chr19 6063576 6063591 LEF1 JASPAR yes 70793532
chr19 6063576 6063591 LEF1 JASPAR yes 112253735
Genes associated with rs566558391[chr19:6063584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More