EnhancerDB
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  3. rs566587289[chr5:90610147]
Enhancers that have rs566587289[chr5:90610147]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566587289[chr5:90610147]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90610142 90610154 PKNOX2 JASPAR yes 64191878
chr5 90610143 90610153 ID4 JASPAR yes 64191879
chr5 90610143 90610153 TCF3 JASPAR yes 64191880
chr5 90610143 90610153 TCF4 JASPAR yes 64191881
chr5 90610144 90610153 SNAI2 JASPAR yes 64191882
chr5 90610145 90610150 USF2 TRANSFAC yes 64191883
Genes associated with rs566587289[chr5:90610147], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More