EnhancerDB
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  3. rs566594096[chr2:227637393]
Enhancers that have rs566594096[chr2:227637393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227617325 227640615 enh6179
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566594096[chr2:227637393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227637386 227637401 FOXP1 JASPAR yes 81494951
chr2 227637388 227637409 IRF1 JASPAR yes 81494952
chr2 227637390 227637405 FOXP1 JASPAR yes 81494953
chr2 227637391 227637406 FOXP1 JASPAR yes 81494954
chr2 227637391 227637412 IRF1 JASPAR yes 81494955
chr2 227637392 227637398 TBP TRANSFAC yes 81494956
chr2 227637392 227637407 FOXP1 JASPAR yes 81494957
chr2 227637392 227637413 IRF1 JASPAR yes 81494958
chr2 227637393 227637408 FOXP1 JASPAR yes 81494959
chr2 227637393 227637414 IRF1 JASPAR yes 81494960
Genes associated with rs566594096[chr2:227637393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More