EnhancerDB
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  3. rs566616069[chr16:68790927]
Enhancers that have rs566616069[chr16:68790927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs566616069[chr16:68790927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68790907 68790927 RREB1 JASPAR yes 11223007
chr16 68790907 68790928 IRF1 JASPAR yes 11223008
chr16 68790909 68790929 RREB1 JASPAR yes 11223009
chr16 68790912 68790927 FOXP1 JASPAR yes 11223012
chr16 68790912 68790933 IRF1 JASPAR yes 11223013
chr16 68790914 68790934 RREB1 JASPAR yes 11223014
chr16 68790917 68790929 IRF1 JASPAR yes 11223015
chr16 68790917 68790932 FOXP1 JASPAR yes 11223016
chr16 68790926 68790932 SOX10 JASPAR yes 11223017
Genes associated with rs566616069[chr16:68790927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More