EnhancerDB
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  3. rs56669273[chr1:205281601]
Enhancers that have rs56669273[chr1:205281601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs56669273[chr1:205281601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205281590 205281605 RFX5 JASPAR yes 34753656
chr1 205281595 205281614 CTCF JASPAR yes 34753657
chr1 205281600 205281606 SOX10 JASPAR yes 34753658
chr1 205281601 205281619 ESR1 JASPAR yes 34753659
Genes associated with rs56669273[chr1:205281601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More