EnhancerDB
  1. Home
  2. SNP
  3. rs566740403[chr1:225883827]
Enhancers that have rs566740403[chr1:225883827]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs566740403[chr1:225883827]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225881029 225884387 ZNF274 GTRD no Cervix (HeLa-S3) 21385320
chr1 225881029 225884387 ZNF274 GTRD no Cervix (HeLa-S3) 107874733
chr1 225881185 225884290 TCF7L2 GTRD no Colon (HCT116) 107874740
chr1 225881349 225884207 TCF7L2 GTRD no Colon (HCT116) 107874748
chr1 225881454 225884242 TCF7L2 GTRD no Colon (HCT116) 107874761
chr1 225881542 225884008 ZNF143 GTRD no Epithelial (MCF-7) 21385332
chr1 225881542 225884008 ZNF143 GTRD no Epithelial (MCF-7) 107874771
chr1 225883645 225883935 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385423
chr1 225883695 225884396 ZNF143 GTRD no Epithelial (MCF-7) 21385424
chr1 225883702 225883839 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385425
chr1 225883706 225884469 ZNF274 GTRD no Liver (HepG2) 21385426
chr1 225883708 225884551 ZNF143 GTRD no Epithelial (MCF-7) 21385427
chr1 225883716 225884373 ZNF274 GTRD no Cervix (HeLa-S3) 21385428
chr1 225883719 225884464 ZNF274 GTRD no Liver (HepG2) 21385429
chr1 225883736 225884239 ZNF143 GTRD no Epithelial (MCF-7) 21385430
chr1 225883786 225884235 ZNF143 GTRD no Epithelial (MCF-7) 21385431
chr1 225883819 225883829 NFKB1 JASPAR yes 35762881
Genes associated with rs566740403[chr1:225883827], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More