EnhancerDB
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  3. rs56676531[chr1:17894318]
Enhancers that have rs56676531[chr1:17894318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs56676531[chr1:17894318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17894317 17894327 NFIA JASPAR yes 27102829
chr1 17894318 17894327 NFIX JASPAR yes 27102830
chr1 17894318 17894339 REST JASPAR yes 27102831
Genes associated with rs56676531[chr1:17894318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More