EnhancerDB
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  3. rs566774923[chr12:52601960]
Enhancers that have rs566774923[chr12:52601960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566774923[chr12:52601960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52601451 52602101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546671
chr12 52601537 52602087 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546672
chr12 52601550 52602060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546673
chr12 52601574 52602090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546674
chr12 52601578 52602034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546675
chr12 52601578 52602238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546676
chr12 52601602 52602006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546678
chr12 52601624 52601984 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546682
chr12 52601643 52602107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546684
chr12 52601694 52602224 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546687
chr12 52601708 52602038 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546688
chr12 52601716 52602220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546689
chr12 52601736 52601966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546690
chr12 52601742 52602126 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546691
chr12 52601773 52602289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546692
chr12 52601790 52602160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546694
chr12 52601801 52602065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546695
chr12 52601809 52602069 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546696
chr12 52601953 52601967 PLAG1 JASPAR yes 120928104
Genes associated with rs566774923[chr12:52601960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More