EnhancerDB
  1. Home
  2. SNP
  3. rs566833943[chr1:41967496]
Enhancers that have rs566833943[chr1:41967496]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
chr1 41967378 41967702 vista1330
VISTA
Transcript factors that have rs566833943[chr1:41967496]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41967076 41967620 POLR2A UCSC Txn Factor no Conserved 107802957
chr1 41967491 41967509 SRF JASPAR yes 28396271
chr1 41967491 41967509 SRF JASPAR yes 118278693
chr1 41967494 41967503 SRF TRANSFAC yes 28396272
chr1 41967494 41967503 SRF TRANSFAC yes 118278694
chr1 41967494 41967506 SRF JASPAR yes 28396273
chr1 41967494 41967506 SRF JASPAR yes 118278695
chr1 41967495 41967505 HOXD13 JASPAR yes 28396274
chr1 41967495 41967505 HOXD13 JASPAR yes 118278696
chr1 41967495 41967506 HOXA10 JASPAR yes 28396275
chr1 41967495 41967506 HOXA10 JASPAR yes 118278697
chr1 41967496 41967505 CDX1 JASPAR yes 28396276
chr1 41967496 41967505 CDX1 JASPAR yes 118278698
chr1 41967496 41967507 CDX2 JASPAR yes 28396277
chr1 41967496 41967507 CDX2 JASPAR yes 118278699
Genes associated with rs566833943[chr1:41967496], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More