EnhancerDB
  1. Home
  2. SNP
  3. rs566860917[chr5:150464764]
Enhancers that have rs566860917[chr5:150464764]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 150446018 150466235 enh22725
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr5 150464543 150466084 vista49695
VISTA
Transcript factors that have rs566860917[chr5:150464764]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150464509 150467114 POLR2A UCSC Txn Factor no Conserved 108537026
chr5 150464533 150464849 EBF1 UCSC Txn Factor no Conserved 108537027
chr5 150464764 150464773 NKX3-2 JASPAR yes 66911567
chr5 150464764 150464773 NKX3-2 JASPAR yes 70740729
Genes associated with rs566860917[chr5:150464764], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More