EnhancerDB
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  3. rs566955788[chr1:204056927]
Enhancers that have rs566955788[chr1:204056927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566955788[chr1:204056927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204056779 204058279 TEF1 GTRD no Bone (Osteoblast) 21370125
chr1 204056779 204058279 TEF1 GTRD no Bone (Osteoblast) 107859592
Genes associated with rs566955788[chr1:204056927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More