EnhancerDB
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  3. rs56703620[chr1:232761976]
Enhancers that have rs56703620[chr1:232761976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs56703620[chr1:232761976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232761965 232761980 FOXA1 JASPAR yes 36179070
chr1 232761967 232761979 FOXC2 JASPAR yes 36179071
chr1 232761968 232761979 FOXB1 JASPAR yes 36179072
chr1 232761968 232761979 FOXC1 JASPAR yes 36179073
chr1 232761969 232761980 FOXA1 JASPAR yes 36179075
chr1 232761970 232761991 IRF1 JASPAR yes 36179076
chr1 232761971 232761992 IRF1 JASPAR yes 36179077
chr1 232761972 232761987 STAT2 JASPAR yes 36179078
chr1 232761972 232761993 IRF1 JASPAR yes 36179079
chr1 232761975 232761990 FOXP1 JASPAR yes 36179080
chr1 232761975 232761996 IRF1 JASPAR yes 36179081
chr1 232761976 232761991 FOXP1 JASPAR yes 36179082
chr1 232761976 232761997 IRF1 JASPAR yes 36179083
Genes associated with rs56703620[chr1:232761976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More