EnhancerDB
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  3. rs56717418[chr6:33563941]
Enhancers that have rs56717418[chr6:33563941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs56717418[chr6:33563941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33563924 33563942 IRF2 JASPAR yes 101158757
chr6 33563929 33563941 IRF1 JASPAR yes 101158758
chr6 33563929 33563944 IRF9 JASPAR yes 101158759
chr6 33563936 33563945 SOX9 JASPAR yes 101158760
Genes associated with rs56717418[chr6:33563941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More