EnhancerDB
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  3. rs56718655[chr17:38666980]
Enhancers that have rs56718655[chr17:38666980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56718655[chr17:38666980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38666350 38667010 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754197
chr17 38666350 38667010 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108255194
chr17 38666535 38667019 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255218
chr17 38666595 38667135 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255228
chr17 38666627 38667011 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255229
chr17 38666966 38666980 POU4F1 JASPAR yes 54219394
chr17 38666967 38666983 POU4F2 JASPAR yes 54219396
chr17 38666967 38666983 POU4F3 JASPAR yes 54219397
chr17 38666972 38666982 OLIG1 JASPAR yes 54219398
chr17 38666972 38666982 OLIG2 JASPAR yes 54219399
chr17 38666972 38666982 OLIG3 JASPAR yes 54219400
chr17 38666972 38666984 TAL1 JASPAR yes 54219401
Genes associated with rs56718655[chr17:38666980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More