EnhancerDB
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  3. rs567239847[chr1:225945542]
Enhancers that have rs567239847[chr1:225945542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs567239847[chr1:225945542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225941037 225946019 STAT3 GTRD no Blood (OCI-LY7) 21385734
chr1 225945273 225946593 SOX2 GTRD no Neural Stem Cells (H9) 21385784
chr1 225945323 225946584 SOX2 GTRD no Neural Stem Cells (H9) 21385785
chr1 225945339 225946552 SOX2 GTRD no Neural Stem Cells (H9) 21385786
chr1 225945366 225946083 SOX2 GTRD no Neural Stem Cells (H9) 21385787
chr1 225945375 225946441 SOX2 GTRD no Neural Stem Cells (H9) 21385788
chr1 225945400 225946561 SOX2 GTRD no Neural Stem Cells (H9) 21385789
chr1 225945434 225946040 SOX2 GTRD no Neural Stem Cells (H9) 21385790
chr1 225945436 225946685 SOX2 GTRD no Neural Stem Cells (H9) 21385791
chr1 225945481 225946013 SOX2 GTRD no Neural Stem Cells (H9) 21385792
chr1 225945521 225946015 SOX2 GTRD no Neural Stem Cells (H9) 21385793
chr1 225945538 225945542 NFE TRANSFAC yes 35768101
chr1 225945542 225945557 FOXP1 JASPAR yes 35768102
Genes associated with rs567239847[chr1:225945542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More