EnhancerDB
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  3. rs567239964[chr1:201515635]
Enhancers that have rs567239964[chr1:201515635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs567239964[chr1:201515635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201513774 201516123 ZNF274 GTRD no Bone Marrow (K562) 107856622
chr1 201513835 201516759 ZNF274 GTRD no Bone Marrow (K562) 107856623
chr1 201514469 201515725 ZNF274 GTRD no Bone Marrow (K562) 107856624
chr1 201514717 201516335 ZNF274 GTRD no Bone Marrow (K562) 107856627
chr1 201514779 201516478 ZNF274 GTRD no Bone Marrow (K562) 107856628
chr1 201514785 201516445 ZNF274 GTRD no Bone Marrow (K562) 107856629
chr1 201514905 201515671 ZNF274 GTRD no Bone Marrow (K562) 107856630
chr1 201514933 201515767 ZNF274 GTRD no Bone Marrow (K562) 107856631
chr1 201515016 201516932 ZNF143 GTRD no Epithelial (MCF-7) 107856635
chr1 201515145 201515910 ZNF274 GTRD no Bone Marrow (K562) 107856640
chr1 201515146 201515654 CTCF UCSC Txn Factor no Conserved 107856641
chr1 201515291 201515671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107856645
chr1 201515377 201515653 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107856648
chr1 201515392 201515642 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107856649
chr1 201515625 201515640 PRDM1 JASPAR yes 34505237
chr1 201515628 201515641 SMAD2 JASPAR yes 34505238
Genes associated with rs567239964[chr1:201515635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More