EnhancerDB
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  3. rs56728509[chr15:67038587]
Enhancers that have rs56728509[chr15:67038587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67009025 67073235 enh16253
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56728509[chr15:67038587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67038580 67038589 PITX3 JASPAR yes 24169439
chr15 67038580 67038590 GSC2 JASPAR yes 24169440
chr15 67038580 67038590 GSC JASPAR yes 24169441
chr15 67038581 67038589 OTX1 JASPAR yes 24169442
chr15 67038581 67038589 OTX2 JASPAR yes 24169443
chr15 67038587 67038593 SOX10 JASPAR yes 24169444
Genes associated with rs56728509[chr15:67038587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More