EnhancerDB
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  3. rs567416600[chr17:55617002]
Enhancers that have rs567416600[chr17:55617002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs567416600[chr17:55617002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55616986 55617007 IRF1 JASPAR yes 54966431
chr17 55616988 55617003 STAT2 JASPAR yes 54966432
chr17 55616990 55617005 IRF9 JASPAR yes 54966433
chr17 55616994 55617006 FOXC2 JASPAR yes 54966435
chr17 55616996 55617004 FOXO3 JASPAR yes 54966436
chr17 55616996 55617006 NFATC3 JASPAR yes 54966437
chr17 55616998 55617012 FOXF2 JASPAR yes 54966438
chr17 55616998 55617013 MEF2C JASPAR yes 54966439
Genes associated with rs567416600[chr17:55617002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More