EnhancerDB
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  3. rs567474855[chr1:25038614]
Enhancers that have rs567474855[chr1:25038614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs567474855[chr1:25038614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25038602 25038618 SOX8 JASPAR yes 27521730
chr1 25038608 25038629 IRF1 JASPAR yes 27521731
chr1 25038610 25038625 PRDM1 JASPAR yes 27521732
chr1 25038610 25038625 STAT2 JASPAR yes 27521733
chr1 25038610 25038631 IRF1 JASPAR yes 27521734
chr1 25038613 25038628 FOXP1 JASPAR yes 27521735
chr1 25038614 25038629 FOXP1 JASPAR yes 27521736
Genes associated with rs567474855[chr1:25038614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More