EnhancerDB
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  3. rs567680715[chr12:52608740]
Enhancers that have rs567680715[chr12:52608740]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs567680715[chr12:52608740]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52608728 52608741 SMAD2 JASPAR yes 120928966
chr12 52608731 52608741 TBR1 JASPAR yes 120928967
chr12 52608732 52608742 TBX21 JASPAR yes 120928968
chr12 52608733 52608741 MGA JASPAR yes 120928969
chr12 52608733 52608741 TBX15 JASPAR yes 120928970
chr12 52608733 52608741 TBX1 JASPAR yes 120928971
chr12 52608733 52608741 TBX4 JASPAR yes 120928972
chr12 52608733 52608741 TBX5 JASPAR yes 120928973
chr12 52608733 52608742 ZEB1 JASPAR yes 120928974
chr12 52608733 52608745 PKNOX1 JASPAR yes 120928975
chr12 52608733 52608745 TGIF1 JASPAR yes 120928976
chr12 52608733 52608746 ZBTB18 JASPAR yes 120928977
chr12 52608734 52608744 FIGLA JASPAR yes 120928978
chr12 52608734 52608744 ID4 JASPAR yes 120928979
chr12 52608734 52608744 TCF3 JASPAR yes 120928980
chr12 52608734 52608744 TCF4 JASPAR yes 120928981
chr12 52608735 52608744 SNAI2 JASPAR yes 120928982
chr12 52608736 52608741 USF2 TRANSFAC yes 120928983
Genes associated with rs567680715[chr12:52608740], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More