EnhancerDB
  1. Home
  2. SNP
  3. rs56776987[chr19:13966315]
Enhancers that have rs56776987[chr19:13966315]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56776987[chr19:13966315]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13964390 13966469 AR GTRD no Prostate (PC-3) 21852771
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13965470 13966728 ZNF143 GTRD no Epithelial (MCF-7) 21852783
chr19 13966111 13966895 TCF7L2 GTRD no Colon (HCT116) 21852785
chr19 13966125 13966798 ZNF143 GTRD no Epithelial (MCF-7) 21852786
chr19 13966153 13966788 ZNF143 GTRD no Epithelial (MCF-7) 21852787
chr19 13966220 13966804 ZNF143 GTRD no Epithelial (MCF-7) 21852788
chr19 13966256 13966732 ZNF274 GTRD no Bone Marrow (K562) 21852789
chr19 13966299 13966320 IRF1 JASPAR yes 112539136
chr19 13966303 13966317 SPIC JASPAR yes 112539137
chr19 13966303 13966318 PRDM1 JASPAR yes 112539138
chr19 13966303 13966318 STAT2 JASPAR yes 112539139
chr19 13966304 13966325 IRF1 JASPAR yes 112539140
chr19 13966307 13966328 ZNF263 JASPAR yes 112539141
chr19 13966308 13966322 STAT1 JASPAR yes 112539142
chr19 13966308 13966323 STAT2 JASPAR yes 112539143
chr19 13966311 13966332 ZNF263 JASPAR yes 112539144
chr19 13966312 13966317 ETS2 TRANSFAC yes 112539145
chr19 13966312 13966333 ZNF263 JASPAR yes 112539146
chr19 13966315 13966336 ZNF263 JASPAR yes 112539147
Genes associated with rs56776987[chr19:13966315], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More