EnhancerDB
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  3. rs567828144[chr1:16488932]
Enhancers that have rs567828144[chr1:16488932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs567828144[chr1:16488932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16488711 16489231 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107802223
chr1 16488928 16488932 H1TF2 TRANSFAC yes 27029410
chr1 16488928 16488932 NFE TRANSFAC yes 27029411
chr1 16488928 16488932 SRF TRANSFAC yes 27029412
chr1 16488929 16488945 SOX4 JASPAR yes 27029413
Genes associated with rs567828144[chr1:16488932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More