EnhancerDB
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  3. rs56794502[chr1:172903548]
Enhancers that have rs56794502[chr1:172903548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs56794502[chr1:172903548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172901710 172904166 TEF1 GTRD no Bone (Osteoblast) 107846311
chr1 172901853 172904128 ZNF274 GTRD no Cervix (HeLa-S3) 21350584
chr1 172901853 172904128 ZNF274 GTRD no Cervix (HeLa-S3) 107846312
chr1 172902119 172904316 ZNF274 GTRD no Cervix (HeLa-S3) 21350588
chr1 172902119 172904316 ZNF274 GTRD no Cervix (HeLa-S3) 107846313
chr1 172902519 172904741 ZBTB33 GTRD no Brain (SK-N-SH) 21350593
chr1 172902519 172904741 ZBTB33 GTRD no Brain (SK-N-SH) 107846314
chr1 172902610 172904240 ZBTB33 GTRD no Brain (SK-N-SH) 21350594
chr1 172902610 172904240 ZBTB33 GTRD no Brain (SK-N-SH) 107846315
chr1 172902620 172903962 ZBTB33 GTRD no Brain (SK-N-SH) 21350596
chr1 172902620 172903962 ZBTB33 GTRD no Brain (SK-N-SH) 107846317
chr1 172902640 172904001 ZBTB33 GTRD no Lung (A549) 107846318
chr1 172902664 172904493 ZBTB33 GTRD no Brain (SK-N-SH) 21350597
chr1 172902664 172904493 ZBTB33 GTRD no Brain (SK-N-SH) 107846319
chr1 172902677 172903981 ZBTB33 GTRD no Lung (A549) 107846320
chr1 172902700 172904182 ZBTB33 GTRD no Brain (SK-N-SH) 21350598
chr1 172902700 172904182 ZBTB33 GTRD no Brain (SK-N-SH) 107846321
chr1 172902714 172904027 ZNF274 GTRD no Cervix (HeLa-S3) 21350599
chr1 172902714 172904027 ZNF274 GTRD no Cervix (HeLa-S3) 107846322
chr1 172902715 172904030 ZBTB33 GTRD no Brain (SK-N-SH) 21350600
chr1 172902715 172904030 ZBTB33 GTRD no Brain (SK-N-SH) 107846323
chr1 172902729 172904356 ZBTB33 GTRD no Brain (SK-N-SH) 21350602
chr1 172902729 172904356 ZBTB33 GTRD no Brain (SK-N-SH) 107846325
chr1 172902766 172904101 ZNF274 GTRD no Cervix (HeLa-S3) 21350603
chr1 172902766 172904101 ZNF274 GTRD no Cervix (HeLa-S3) 107846326
chr1 172902772 172904434 ZBTB33 GTRD no Brain (SK-N-SH) 21350605
chr1 172902772 172904434 ZBTB33 GTRD no Brain (SK-N-SH) 107846328
chr1 172902825 172904165 TCF7L2 GTRD no Colon (HCT116) 107846331
chr1 172902994 172903698 GATA2 UCSC Txn Factor no Conserved 107846356
chr1 172903001 172903688 EP300 UCSC Txn Factor no Conserved 107846359
chr1 172903014 172903719 TCF12 UCSC Txn Factor no Conserved 107846366
chr1 172903024 172904482 TCF7L2 GTRD no Colon (HCT116) 107846373
chr1 172903143 172903719 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846417
chr1 172903148 172903688 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846418
chr1 172903148 172903698 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350664
chr1 172903148 172903698 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846419
chr1 172903160 172903676 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350666
chr1 172903160 172903676 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846421
chr1 172903198 172904276 TCF7L2 GTRD no Colon (HCT116) 107846425
chr1 172903216 172904567 TCF7L2 GTRD no Colon (HCT116) 107846426
chr1 172903224 172903680 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350670
chr1 172903224 172903680 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846427
chr1 172903252 172904381 TCF7L2 GTRD no Colon (HCT116) 107846428
chr1 172903320 172903590 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846429
chr1 172903339 172903949 ZBTB33 GTRD no Brain (SK-N-SH) 21350671
chr1 172903339 172903949 ZBTB33 GTRD no Brain (SK-N-SH) 107846430
chr1 172903344 172904590 TCF7L2 GTRD no Colon (HCT116) 107846431
chr1 172903401 172904362 P63 GTRD no Skin (Keratinocyte) 21350672
chr1 172903401 172904362 P63 GTRD no Skin (Keratinocyte) 107846433
chr1 172903405 172903609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350673
chr1 172903405 172903609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846434
chr1 172903457 172904298 ZBTB33 GTRD no Brain (SK-N-SH) 21350674
chr1 172903457 172904298 ZBTB33 GTRD no Brain (SK-N-SH) 107846435
chr1 172903471 172903979 TCF7L2 GTRD no Colon (HCT116) 107846436
chr1 172903474 172904066 ZBTB33 GTRD no Brain (SK-N-SH) 21350675
chr1 172903474 172904066 ZBTB33 GTRD no Brain (SK-N-SH) 107846437
chr1 172903492 172904097 ZBTB33 GTRD no Brain (SK-N-SH) 21350676
chr1 172903492 172904097 ZBTB33 GTRD no Brain (SK-N-SH) 107846438
chr1 172903496 172904130 ZBTB33 GTRD no Brain (SK-N-SH) 21350677
chr1 172903496 172904130 ZBTB33 GTRD no Brain (SK-N-SH) 107846439
chr1 172903502 172903969 TCF7L2 GTRD no Colon (HCT116) 107846440
chr1 172903519 172904240 TCF7L2 GTRD no Colon (HCT116) 107846441
chr1 172903520 172903784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350678
chr1 172903520 172903784 CEBPB UCSC Txn Factor no Conserved 107846442
chr1 172903520 172903784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846443
chr1 172903527 172903783 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846444
chr1 172903535 172903554 PAX5 JASPAR yes 33168394
chr1 172903544 172903555 STAT3 JASPAR yes 33168395
Genes associated with rs56794502[chr1:172903548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More