EnhancerDB
  1. Home
  2. SNP
  3. rs567994478[chr17:39069018]
Enhancers that have rs567994478[chr17:39069018]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs567994478[chr17:39069018]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39068930 39070187 ZNF143 GTRD no Epithelial (MCF-7) 21757218
chr17 39068930 39070187 ZNF143 GTRD no Epithelial (MCF-7) 108257931
chr17 39068932 39070569 ZBTB33 GTRD no Lung (A549) 21757219
chr17 39068932 39070569 ZBTB33 GTRD no Lung (A549) 108257932
chr17 39068942 39070399 ZBTB33 GTRD no Lung (A549) 21757220
chr17 39068942 39070399 ZBTB33 GTRD no Lung (A549) 108257933
chr17 39068972 39070166 ZNF274 GTRD no Cervix (HeLa-S3) 21757221
chr17 39068972 39070166 ZNF274 GTRD no Cervix (HeLa-S3) 108257934
chr17 39069018 39069022 LFA1 TRANSFAC yes 54243684
Genes associated with rs567994478[chr17:39069018], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More