EnhancerDB
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  3. rs568117005[chr1:8960993]
Enhancers that have rs568117005[chr1:8960993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs568117005[chr1:8960993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8960982 8960993 FOSL2 JASPAR yes 26606248
chr1 8960990 8960999 ZEB1 JASPAR yes 26606249
chr1 8960991 8961001 ID4 JASPAR yes 26606250
chr1 8960991 8961001 TCF3 JASPAR yes 26606251
chr1 8960991 8961001 TCF4 JASPAR yes 26606252
chr1 8960992 8961001 SNAI2 JASPAR yes 26606253
chr1 8960993 8960998 USF2 TRANSFAC yes 26606254
Genes associated with rs568117005[chr1:8960993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More