EnhancerDB
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  3. rs568178480[chr17:59400197]
Enhancers that have rs568178480[chr17:59400197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs568178480[chr17:59400197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 21777324
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 108279396
chr17 59400176 59400197 ZNF263 JASPAR yes 55148308
chr17 59400185 59400206 ZNF263 JASPAR yes 55148310
chr17 59400187 59400202 PRDM1 JASPAR yes 55148311
chr17 59400191 59400206 PRDM1 JASPAR yes 55148312
chr17 59400192 59400213 ZNF263 JASPAR yes 55148313
chr17 59400193 59400208 PRDM1 JASPAR yes 55148314
chr17 59400194 59400215 ZNF263 JASPAR yes 55148315
chr17 59400195 59400210 PRDM1 JASPAR yes 55148316
chr17 59400197 59400212 PRDM1 JASPAR yes 55148317
Genes associated with rs568178480[chr17:59400197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More