EnhancerDB
  1. Home
  2. SNP
  3. rs56821372[chr17:25836688]
Enhancers that have rs56821372[chr17:25836688]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56821372[chr17:25836688]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25836686 25836697 FOXA1 JASPAR yes 53639007
chr17 25836686 25836701 FOXA1 JASPAR yes 53639008
chr17 25836687 25836699 FOXC2 JASPAR yes 53639009
chr17 25836687 25836707 RREB1 JASPAR yes 53639010
chr17 25836688 25836700 FOXI1 JASPAR yes 53639011
chr17 25836688 25836708 RREB1 JASPAR yes 53639012
Genes associated with rs56821372[chr17:25836688], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More