EnhancerDB
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  3. rs568242620[chr1:54782084]
Enhancers that have rs568242620[chr1:54782084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs568242620[chr1:54782084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54782072 54782086 PLAG1 JASPAR yes 28972534
chr1 54782079 54782084 SP1 TRANSFAC yes 28972535
chr1 54782080 54782085 SP1 TRANSFAC yes 28972536
chr1 54782084 54782101 RXRA JASPAR yes 28972537
Genes associated with rs568242620[chr1:54782084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More