EnhancerDB
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  3. rs56825730[chr11:61771611]
Enhancers that have rs56825730[chr11:61771611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61760605 61775094 enh43550
Liver (HepG2) Brain (SK-N-MC) Large Intestine Ovary Bone (Osteoblast) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs56825730[chr11:61771611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61770901 61771922 ZNF274 GTRD no Cervix (HeLa-S3) 107973493
chr11 61771025 61772250 ZNF143 GTRD no Epithelial (MCF-7) 107973494
chr11 61771046 61772203 ZNF143 GTRD no Epithelial (MCF-7) 107973495
chr11 61771082 61773014 ZNF143 GTRD no Epithelial (MCF-7) 107973496
chr11 61771085 61772018 ZNF143 GTRD no Epithelial (MCF-7) 107973497
chr11 61771165 61771813 TCF7L2 GTRD no Colon (HCT116) 21487525
chr11 61771188 61771938 TCF7L2 GTRD no Colon (HCT116) 21487526
chr11 61771188 61771938 TCF7L2 GTRD no Colon (HCT116) 107973498
chr11 61771246 61772819 TCF7L2 GTRD no Colon (HCT116) 21487527
chr11 61771246 61772819 TCF7L2 GTRD no Colon (HCT116) 107973499
chr11 61771271 61771910 TCF7L2 GTRD no Colon (HCT116) 21487528
chr11 61771493 61771832 TCF7L2 GTRD no Colon (HCT116) 21487529
chr11 61771601 61771622 IRF1 JASPAR yes 39177932
chr11 61771603 61771618 PRDM1 JASPAR yes 39177933
chr11 61771605 61771626 IRF1 JASPAR yes 39177934
chr11 61771606 61771621 FOXP1 JASPAR yes 39177935
chr11 61771606 61771627 IRF1 JASPAR yes 39177936
chr11 61771607 61771628 IRF1 JASPAR yes 39177937
chr11 61771608 61771623 FOXP1 JASPAR yes 39177938
chr11 61771610 61771625 FOXP1 JASPAR yes 39177939
chr11 61771611 61771626 FOXP1 JASPAR yes 39177940
Genes associated with rs56825730[chr11:61771611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More