EnhancerDB
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  3. rs568295878[chr1:225646856]
Enhancers that have rs568295878[chr1:225646856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568295878[chr1:225646856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225646583 225647318 ZBTB33 GTRD no Brain (SK-N-SH) 21384800
chr1 225646617 225647220 ZBTB33 GTRD no Brain (SK-N-SH) 21384801
chr1 225646653 225647211 ZNF143 GTRD no Epithelial (MCF-7) 21384802
chr1 225646837 225646858 IRF1 JASPAR yes 35743040
chr1 225646838 225646859 IRF1 JASPAR yes 35743042
chr1 225646839 225646860 IRF1 JASPAR yes 35743044
chr1 225646840 225646861 IRF1 JASPAR yes 35743046
chr1 225646841 225646856 FOXP1 JASPAR yes 35743047
chr1 225646841 225646862 IRF1 JASPAR yes 35743048
chr1 225646842 225646857 FOXP1 JASPAR yes 35743049
chr1 225646844 225646859 FOXP1 JASPAR yes 35743050
chr1 225646845 225646866 IRF1 JASPAR yes 35743051
chr1 225646846 225646861 FOXP1 JASPAR yes 35743052
chr1 225646846 225646867 IRF1 JASPAR yes 35743053
chr1 225646847 225646868 IRF1 JASPAR yes 35743054
chr1 225646849 225647180 ZNF143 GTRD no Epithelial (MCF-7) 21384803
Genes associated with rs568295878[chr1:225646856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More