EnhancerDB
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  3. rs568320244[chr17:48287020]
Enhancers that have rs568320244[chr17:48287020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568320244[chr17:48287020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48286690 48287246 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769590
chr17 48286822 48287178 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769591
chr17 48286830 48287059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769592
chr17 48286839 48287079 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21769593
chr17 48286842 48287121 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769594
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270622
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270623
chr17 48286880 48287184 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21769595
chr17 48286886 48287146 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21769596
chr17 48286889 48287093 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769597
chr17 48286900 48287150 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21769598
chr17 48286909 48287020 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769599
chr17 48286927 48287183 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769600
chr17 48286966 48287336 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769601
chr17 48287019 48287024 SP1 TRANSFAC yes 54687052
chr17 48287020 48287025 SP1 TRANSFAC yes 54687053
Genes associated with rs568320244[chr17:48287020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More