EnhancerDB
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  3. rs56838896[chr6:25013391]
Enhancers that have rs56838896[chr6:25013391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs56838896[chr6:25013391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25013377 25013398 IRF1 JASPAR yes 100813611
chr6 25013381 25013393 IRF1 JASPAR yes 100813612
chr6 25013384 25013399 LEF1 JASPAR yes 100813613
chr6 25013384 25013405 IRF1 JASPAR yes 100813614
chr6 25013391 25013406 FOXP1 JASPAR yes 100813615
Genes associated with rs56838896[chr6:25013391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More