EnhancerDB
  1. Home
  2. SNP
  3. rs568454401[chr5:179195466]
Enhancers that have rs568454401[chr5:179195466]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179185005 179195695 enh8908
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Blood (T-cell) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs568454401[chr5:179195466]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179195456 179195471 FOXP1 JASPAR yes 68189242
chr5 179195457 179195478 IRF1 JASPAR yes 68189243
chr5 179195458 179195470 FOXC2 JASPAR yes 68189244
chr5 179195459 179195470 FOXP2 JASPAR yes 68189245
chr5 179195461 179195476 STAT2 JASPAR yes 68189246
Genes associated with rs568454401[chr5:179195466], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More