EnhancerDB
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  3. rs568494048[chr1:54824704]
Enhancers that have rs568494048[chr1:54824704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs568494048[chr1:54824704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54824699 54824714 NR2C2 JASPAR yes 28977311
chr1 54824700 54824714 RXRB JASPAR yes 28977312
chr1 54824700 54824714 RXRG JASPAR yes 28977313
chr1 54824701 54824721 RREB1 JASPAR yes 28977314
chr1 54824704 54824714 RORA JASPAR yes 28977315
Genes associated with rs568494048[chr1:54824704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More