EnhancerDB
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  3. rs568518555[chr1:112048309]
Enhancers that have rs568518555[chr1:112048309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112044245 112062755 enh565
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568518555[chr1:112048309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112048194 112048458 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329279
chr1 112048194 112048458 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822138
chr1 112048209 112048479 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329280
chr1 112048209 112048479 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822139
chr1 112048255 112048939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329281
chr1 112048255 112048939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822140
chr1 112048295 112048811 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329282
chr1 112048295 112048811 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822141
chr1 112048298 112048894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329283
chr1 112048298 112048894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822142
chr1 112048303 112048317 TLX1 JASPAR yes 31523847
Genes associated with rs568518555[chr1:112048309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More