EnhancerDB
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  3. rs56855081[chr17:65388685]
Enhancers that have rs56855081[chr17:65388685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65375805 65390455 enh32308
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs56855081[chr17:65388685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65388290 65389722 TEF1 GTRD no Bone (Osteoblast) 21782123
chr17 65388290 65389722 TEF1 GTRD no Bone (Osteoblast) 108285723
chr17 65388680 65388695 SOX21 JASPAR yes 55497589
Genes associated with rs56855081[chr17:65388685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More