EnhancerDB
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  3. rs56855389[chr5:148820096]
Enhancers that have rs56855389[chr5:148820096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56855389[chr5:148820096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148820082 148820103 REST JASPAR yes 66814328
chr5 148820083 148820102 REST JASPAR yes 66814329
chr5 148820085 148820100 TFAP2A JASPAR yes 66814330
chr5 148820088 148820100 TFAP2A JASPAR yes 66814331
chr5 148820088 148820100 TFAP2B JASPAR yes 66814332
chr5 148820088 148820100 TFAP2C JASPAR yes 66814333
chr5 148820088 148820103 TFAP2A JASPAR yes 66814334
chr5 148820088 148820103 TFAP2C JASPAR yes 66814335
chr5 148820089 148820098 TFAP2A JASPAR yes 66814336
chr5 148820090 148820099 TFAP2A JASPAR yes 66814337
Genes associated with rs56855389[chr5:148820096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More