EnhancerDB
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  3. rs568562892[chr16:19148925]
Enhancers that have rs568562892[chr16:19148925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19138245 19156894 enh16588
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568562892[chr16:19148925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19148921 19148937 GLIS1 JASPAR yes 9852979
chr16 19148922 19148932 ZNF740 JASPAR yes 9852980
chr16 19148922 19148936 GLIS2 JASPAR yes 9852981
chr16 19148922 19148936 GLIS3 JASPAR yes 9852982
chr16 19148924 19148945 REST JASPAR yes 9852983
Genes associated with rs568562892[chr16:19148925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More