EnhancerDB
  1. Home
  2. SNP
  3. rs568615253[chr19:2569821]
Enhancers that have rs568615253[chr19:2569821]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs568615253[chr19:2569821]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2569808 2569823 RUNX2 JASPAR yes 112076377
chr19 2569817 2569829 CREB1 JASPAR yes 112076381
chr19 2569818 2569823 ATF1 TRANSFAC yes 112076382
Genes associated with rs568615253[chr19:2569821], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More