EnhancerDB
  1. Home
  2. SNP
  3. rs56879370[chr16:87818285]
Enhancers that have rs56879370[chr16:87818285]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56879370[chr16:87818285]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87817659 87819047 TCF7L2 GTRD no Colon (HCT116) 21734469
chr16 87818068 87818893 TCF7L2 GTRD no Colon (HCT116) 21734470
chr16 87818246 87819264 ZNF143 GTRD no Epithelial (MCF-7) 21734471
chr16 87818258 87819050 TCF7L2 GTRD no Colon (HCT116) 21734472
chr16 87818270 87819071 TCF7L2 GTRD no Colon (HCT116) 21734473
chr16 87818282 87818297 FOXP1 JASPAR yes 12239050
Genes associated with rs56879370[chr16:87818285], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More